Россия
Abstract. The population-genomic structure of the Vyatka horses was studied in the context of 10 male genealogical lines bred in the breed. Purpose. Evaluation of the genetic and breeding potential of the Vyatka breed, as well as the influence of factory breeds. Methods. Isolation of DNA from the hair follicles of Vyatka horses (n = 38) was performed using “ExtraGene DNA Prep 2000” by allele-specific PCR. Statistical calculations of allele frequencies and the types of studied loci were performed using MS Excel 10 software. Results. The polymorphism of MSTN, GYS1, DMTR3, CAST, and PRLR genes in Vyatka breed lines was studied for the first time. According to the frequency of occurrence CAST G/A (0.472) and PRLR G/C (0.417), as well as the genotype MSTN T/T (0.579) is somewhat dominated by the heterozygous genotypes characteristic of local breeds. They revealed polysaccharide accumulation mutation PSSM1 (0.189), characteristic of draft horses, and the DMRT3 mutation (0.087), which determines the ability for a non-standard gait - amble, noted among Oryol trotters, which indicates the presence of draft and trotting blood in the lines carrying these alleles. MSTN/C and DMRT3/A alleles, which are not typical for aborigines, are noted in Znatok line, whose representatives are distinguished by a lightweight body type and productive movements. The carriers of the mutant defective GYS1 allele (PSSM1) were identified in five lines: Bob, Gabizon, Buran, Dobrik, and Malakhit. Genotyping of all used stallions for genes associated with economically useful traits will allow more efficient selection in the Vyatka breed and prevent the spread of unwanted alleles, which is especially important for small breeds. Scientific novelty. For the first time, an intrapopulation genomic analysis of the domestic horse breed was studied in the interline aspect, and the influence of factory breeds on certain genealogical lines was shown. The polymorphism of the calpastatin (CAST) and prolactin receptor (PRLR) genes has not previously been studied in horse breeding.
horses, Vyatka breed, genetics, breeding, DNA markers, genotype assessment, genealogical lines
1. Belousova N. F., Bass S. P., Kirkin A. I. Monitoring genealogicheskoy struktury liniy v vyatskoy porode loshadey [Monitoring of the genealogical structure of lines among the Vyatka horses] // Konevodstvo i Konny Sport. 2022. No. 1. Pp. 22-25. (In Russian.)
2. Khrabrova L. A. Ispol'zovanie DNK tekhnologiy v konevodstve. Effektivnoe zhivotnovodstvo, 2015, 6 (115):13-17[Khrabrova L.A. Use of DNA technologies in horse breeding // Effective animal husbandry. 2015. 6 (115). pp. 13-17. (In Russian.)
3. Aydarov V. A., Vikulova L. L., Sorokin S. I. Izuchenie polimorfnykh variantov gena miostatina, assotsiirovannykh s distantsionnymi sposobnostyami loshadey chistokrovnoy verkhovoy porody [Study of polymorphic variants of the myostatin gene associated with the distance abilities of Thoroughbred riding horses] // Konevodstvo i konnyy sport. 2017. No. 4. Pp. 14-15. (In Russian.)
4. Voronkova V. N., Stolpovskiy Yu. A. Otsenka geneticheskogo raznoobraziya aborigennykh porod Sayano-Altayskogo regiona s ispol’zovaniem yadernykh i mitokhondrial'nykh DNK-markerov [Assessment of the genetic diversity of native breeds of the Sayano-Altai region using nuclear and mitochondrial DNA markers] // Aborigennoe konevodstvo Rossii: istoriya, sovremennost’, perspektivy. Arkhangelsk, 2018. Pp. 60-69 (In Russian.)
5. Zinov’eva S. A., Khrabrova L. A., Sorokin S. I., Blokhina N. V., Zelenchenkova A. A. Spektr gaplotipov miostatina (MSTN) u loshadey raznykh porod [Myostatin haplotype spectrum (MSTN) among the horses of different breeds] // Veterinary, Zootechnics and Biotechnology. 2020. No. 3. Pp. 57-63. (In Russian.)
6. Khrabrova L. A., Blokhina N. V., Sorokin S. I. Variabel’nost’ genotipov miostatina (MSTN) u loshadey aborigennykh porod [Variability of myostatin genotypes (MSTN) among the horses of aboriginal breeds] // Konevodstvo i Konnyy Sport. 2020. No. 1. Pp. 26-27. (In Russian.)
7. Khrabrova L. A., Blokhina N. V., Sorokin S. I. Polimorfizm genov GYS1, DMTR3 i MSTN u loshadey mestnykh porod [Polymorphism of GYS1, DMTR3 and MSTN genes among the horses of local breeds] // Aborigennye porody loshadey - natsional’noe dostoyanie Rossii: Arkhangel’skaya oblast’. Arkhangelsk, 2022. Pp. 258-268. (In Russian.)
8. Khrabrova L. A. Zaytsev A. M., Kalashnikov V. V., Blokhina N. V., Belousova N. F., Sorokin S. I. Struktura vyatskoy porody loshadey po gaplogruppam mtDNK [The structure of the Vyatka horse breed according to mtDNA haplogroups] // Konevodstvo i konnyy sport. 2020. No. 4. Pp. 4-7. (In Russian.)
9. Belousova N. F., Bass S. P., Zinoveva S. A., Kozlov S. A., Markin S. S. Features of coat color and markings and impact of dun factor on Vyatka horse breed // International Scientific-Practical Conference “Agriculture and Food Security: Technology, Innovation, Markets, Human Resources” (FIES 2019). Kazan, 2019. Vol. 17. DOI:https://doi.org/10.1051/bioconf/20201700202.
10. Vishnevets A. V., Krasochko P. P., Budrevich O. L. Polimorfizm gena MSTN (miostatin) i ispol’zovanie ego v selektsii loshadey verkhovykh porod [Polymorphism of the MSTN (myostatin) gene and its use in breeding of riding horses] // Transactions of the educational establishment “Vitebsk the Order of “the Badge of Honor” State Academy of Veterinary Medicine”: 2017. Vol. 53. Iss. 4. Pp. 90-94. (In Russian.)
11. Binns M. M., Boehler D. A., Lambert D. H. Identification of the myostatin locus (MSTN) as having a major effect on optimum racing distance in the Thoroughbred horse in the USA // Animal genetics. 2010. Vol. 41 (2). Pp. 28-35.
12. Hill E. W., Gu J., Eivers S. S., Fonseca R. G., McGivney B. A., Govindarajan P., Orr N., Katz L. M., MacHugh D. E., MacHugh D. A sequence polymorphism in MSTN predicts sprinting ability and racing stamina in thoroughbred horses // PloS ONE. 2010. Vol. 5. No. 1. DOI:https://doi.org/10.1371/journal.pone.0008645
13. Pira E., Vassa G. M., Dettori M. L. et al. Polymorphism at Myostatin gene (MSTN) and the associations with sport performances in Anglo-Arabian racehorses // Animals. 2021. No. 11. Pp. 964-976.
14. Staiger E. A., Almén M. S., Promerová M. et al. The evolutionary history of the DMRT3 “Gait keeper” haplotype // Animal Genetics. 2017. Vol. 48. No. 5. Pp. 551-559.
15. Promerova M. Andersson L. S., Juras R., Penedo M. C. T., Reissmann M., Tozaki T., Bellone R., Dunner S., Horın P., Imsland F., Imsland P., Mikko S., Modry D., Roed K. H., Schwochow D., Vega-Pla J. L., Mehrabani-Yeganeh H., Yousefi-Mashouf N., Cothran E. G., Lindgren G., Andersson L. Worldwide frequency distribution of the “Gait keeper” mutation in the DMRT3 gene // Stichting International Foundation for Animal Genetics. 2014. No. 45. Pp. 274-282.
16. Valberg S. J., Mickelson J. R. The interplay of genetics, exercise and nutrition in polysaccharide storage myoparty // Proceedings of the 25 Annual American College of Veterinary Internal Medicine Conference, Seattle. 2007. Pp. 163-165.
17. Raynaud P. C., Jayat-Vignoles, M.P. Laforet, H. Leveziel, V. Amarger Four promoters direct expression of the calpastatin gene // Arch Biochem Biophys. 437 (1). 1 May 2005. pp. 69-77.
18. Karpova E. D. Polimorfizm genov GH, CAST, analiz assotsiatsiy ikh genotipov s pokazatelyami lipidnogo obmena, immunnogo statusa, produktivnosti ovets v ontogeneze: dis… kand. biol. nauk: 06.02.07 [Polymorphism of the GH, CAST genes, analysis of associations of their genotypes with the indicators of lipid metabolism, immune status, productivity of sheep in ontogenesis: abstract of the dissertation … candidate of biological sciences: 06.02.07]. Stavropol, 2021. 121 p. (In Russian.)
19. Lushnikov V. P., Fetisova T. O., Selionova M. A., Chizhova L. N., Surzhikova E. S. Polimorfizm genov somatotropina (9GH), kal’pastatina (CAST), differentsial’nogo faktora rosta (GDF 9) u ovets tatarstanskoy porody [Polymorphism of somatotropin (9GH), calpastatin (CAST), differential growth factor (GDF 9) genes among the sheep of the Tatarstan breed] // Sheep, goats, wool business. 2020. No. 1. Pp. 2-3. (In Russian)
20. Leonova M. A., Svyatogorova A. E. Vosproizvoditel’nye kachestva sviney porody landras raznykh genotipov po genam PRLR i MC4R [Reproductive qualities of landrace pigs of different genotypes by PRLR and MC4R genes] [e-resource] // Scientific Journal of KubSAU. Polythematic online scientific journal of Kuban State Agrarian University URL: http://ej.kubagro.ru/2014/09/pdf/65.pdf (date of reference: 28.09.2022) (In Russian.)
21. Leonova M. A., Getmantseva L. V., Usatov A. V. Rol’ gena prolaktina i ego retseptora v formirovanii priznakov produktivnosti sel’skokhozyaystvennykh zhivotnykh [The role of the prolactin gene and its receptor in the formation of productivity traits among farm animals] // Genetics and animal breeding. 2014. No. 4. Pp. 37-39. (In Russian.)
22. Khrabrova L. A., Blokhina N. V., Belousova N. F., Kotran E. G. Otsenka genealogicheskoy struktury vyatskoy porody loshadey (Equus ferus caballus) s ispol'zovaniem analiza DNK [Evaluation of the genealogical structure of the Vyatka horse breed (Equus ferus caballus) using DNA analysis] // Russian Journal of Genetics. 2022. Vol. 88. No. 4. Pp. 462-466. (In Russian.)
23. Garafutdinov R. R., Gaynullina K. P., Kir’yanova O. Yu., Yurina A. V., Dolmatova I. Yu., Loginov O. N., Chemeris A. V. Polimorfizm DNK loshadi Equus caballus i metody ego vyyavleniya [DNA polymorphism of the horse Equus caballus and its detection methods] // Biomics. 2020. Vol. 12 (2). Pp. 272-299. (In Russian.)